Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nkiras2NFKB inhibitor interacting Ras-like 2. (192 aa)    
Predicted Functional Partners:
ralgapb
Ral GTPase activating protein, beta subunit (non-catalytic).
    
 
 0.893
dnajc11
DnaJ (Hsp40) homolog, subfamily C, member 11a.
    
   0.852
ralgapa2
Ral GTPase activating protein, alpha subunit 2 (catalytic).
    
 
 0.801
ralgapa1
Ral GTPase activating protein, alpha subunit 1 (catalytic).
    
 
 0.801
LOC101164973
J domain-containing protein.
    
   0.673
gfod2
Glucose-fructose oxidoreductase domain containing 2.
    
   0.667
LOC101174141
Glucose-fructose oxidoreductase domain containing 1.
    
   0.667
pdlim2
PDZ and LIM domain 2 (mystique).
      
 0.647
pomt1
Protein-O-mannosyltransferase 1.
      
 0.584
LOC101168652
Alpha-2-HS-glycoprotein 2.
      
 0.582
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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