STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf366Zinc finger protein 366. (754 aa)    
Predicted Functional Partners:
thnsl2
Threonine synthase-like 2.
      
 0.876
DDRGK1
DDRGK domain containing 1.
      
 0.829
ptpra
Receptor-type tyrosine-protein phosphatase alpha.
     
 0.743
ubox5
U-box domain containing 5.
     
 0.740
gnrh2
GnRH-associated peptide 2; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.
    
 0.659
LOC100049520
POU domain protein.
    
 0.599
hhex
Homeobox domain-containing protein.
   
 
 0.589
dclk3
Doublecortin-like kinase 3.
   
 
 0.578
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 
 0.574
prrx1
Paired related homeobox 1a.
   
 
 0.572
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.