STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
znf366Zinc finger protein 366. (754 aa)    
Predicted Functional Partners:
thnsl2
Threonine synthase-like 2.
      
 0.872
ubox5
U-box domain containing 5.
     
 0.817
ptpra
Receptor-type tyrosine-protein phosphatase alpha.
    
 
 0.814
DDRGK1
DDRGK domain containing 1.
      
 0.758
LOC101154795
Homeobox domain-containing protein.
   
 
 0.717
otx2
Homeobox domain-containing protein.
   
 
 0.717
LOC101162607
Leucine zipper, putative tumor suppressor family member 3b.
    
 0.712
FASTKD5
FAST kinase domains 5.
      
 0.700
psma3
Proteasome subunit alpha type.
    
  0.697
nrip1
Nuclear receptor interacting protein 1b.
   
 
 0.692
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.