STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101160985Fatty acid binding protein 1b, tandem duplicate 1. (127 aa)    
Predicted Functional Partners:
LOC101164843
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
 
 0.945
LOC101168652
Alpha-2-HS-glycoprotein 2.
   
  
 0.805
APOH
Uncharacterized protein.
   
  
 0.685
APOH-2
Apolipoprotein H.
   
  
 0.685
PPARA
Peroxisome proliferator-activated receptor alpha b.
    
 0.679
pparg
Uncharacterized protein.
    
 0.679
LOC101164089
Fatty acid binding protein 11b; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
 
 0.659
ppara
Uncharacterized protein.
    
 0.646
H2MBB3_ORYLA
Vitellogenin domain-containing protein.
   
 
 0.644
LOC101158990
Apolipoprotein Bb, tandem duplicate 2.
   
 
 0.644
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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