Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
keap1Kelch-like ECH-associated protein 1b. (621 aa)    
Predicted Functional Partners:
LOC101173589
Si:rp71-68n21.9.
  
 
 
0.934
klhl13
Kelch-like family member 13.
  
 
 
0.932
nfe2l2
Nuclear factor, erythroid 2-like 2a.
    
 0.927
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.925
rhobtb2
Rho related BTB domain containing 2a.
    
 0.910
LOC101172920
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.909
LOC101159396
Kelch-like ECH-associated protein 1a.
  
  
0.905
LOC101161977
Rho related BTB domain containing 4.
    
  0.904
sqstm1
Sequestosome 1.
    
 0.851
palb2
PALB2_WD40 domain-containing protein.
   
 0.821
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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