STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptger4G_PROTEIN_RECEP_F1_2 domain-containing protein. (443 aa)    
Predicted Functional Partners:
LOC101159441
Axin 2 (conductin, axil).
     
 0.612
morn5
MORN repeat containing 5.
      
 0.560
timp-2b
Tissue inhibitor of metalloproteinase-2b.
   
 
 0.507
ptgs2
EGF-like domain-containing protein.
      
 0.498
slc27a6
Solute carrier family 27 member 6.
     
 0.498
aamp
Angio-associated, migratory cell protein.
     
  0.497
AXIN2
Axin 2.
     
 0.489
ptges
Prostaglandin E synthase.
     
 0.485
ckap5
Cytoskeleton associated protein 5.
    
 0.476
pgr
Uncharacterized protein.
     
 0.468
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.