STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101164792Uncharacterized protein. (352 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 0.971
cbl
Cbl proto-oncogene, E3 ubiquitin protein ligase.
    
 0.897
LOC101163758
Uncharacterized protein.
    
 0.876
cblb
Cbl proto-oncogene B, E3 ubiquitin protein ligase.
    
 0.876
synj1
Synaptojanin 1.
    
 
 0.833
LOC101169984
Receptor protein-tyrosine kinase.
    
 0.792
egfr
Receptor protein-tyrosine kinase.
    
 0.792
LOC101162128
Dynamin 2a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 0.702
LOC101163560
Tyrosine-protein kinase receptor.
    
  0.697
LOC101173298
Tyrosine-protein kinase receptor.
    
  0.697
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.