Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101164792Uncharacterized protein. (352 aa)    
Predicted Functional Partners:
cbl
Cbl proto-oncogene, E3 ubiquitin protein ligase.
    
 0.893
synj1
Synaptojanin 1.
    
 
 0.882
LOC101163758
Uncharacterized protein.
    
  0.871
cblb
Cbl proto-oncogene B, E3 ubiquitin protein ligase.
    
  0.871
LOC101158476
Cbl proto-oncogene C, E3 ubiquitin protein ligase.
    
  0.871
LOC101169984
Receptor protein-tyrosine kinase.
    
 0.809
egfr
Receptor protein-tyrosine kinase.
    
 0.809
gak
Cyclin G associated kinase.
   
 0.799
LOC101162128
Dynamin 2a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 0.757
LOC101155909
Dynamin 2b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 0.757
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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