Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101175261Pantothenate kinase 1a. (452 aa)    
Predicted Functional Partners:
ppcs
Phosphopantothenoylcysteine synthetase.
     
 0.972
ppcdc
Phosphopantothenoylcysteine decarboxylase.
     
 0.960
coasy
CoA synthase.
     
 0.955
LOC101161204
Pantothenate kinase 2.
  
  
 
0.901
LOC101171013
Uncharacterized protein.
     
  0.900
LOC101155077
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
     
  0.900
H2MFT6_ORYLA
Uncharacterized protein.
   
   0.812
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
    
 
 0.722
ccdc65
NYD-SP28 domain-containing protein.
   
 
 0.669
drc1
Uncharacterized protein.
   
 
 0.655
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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