rtraf protein (Oryzias latipes) - STRING interaction network

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[Homology]

Score

rtraf

RNA transcription, translation and transport factor. (241 aa)

Predicted Functional Partners:

c21h2orf49

0.999

fam98b

0.999

rtcb

0.999

fam98a

0.997

ddx1

0.991

LOC101167721

0.976

zbtb8os

0.970

LOC101162877

0.821

med29

0.742

thoc7

0.738

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101162877	LOC101167721	ENSORLP00000014168	ENSORLP00000009679	LSM12 homolog b.	Uncharacterized protein.	0.440
LOC101162877	fam98a	ENSORLP00000014168	ENSORLP00000044105	LSM12 homolog b.	Uncharacterized protein.	0.703
LOC101162877	rtcb	ENSORLP00000014168	ENSORLP00000024933	LSM12 homolog b.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.570
LOC101162877	rtraf	ENSORLP00000014168	ENSORLP00000004793	LSM12 homolog b.	RNA transcription, translation and transport factor.	0.821
LOC101167721	LOC101162877	ENSORLP00000009679	ENSORLP00000014168	Uncharacterized protein.	LSM12 homolog b.	0.440
LOC101167721	c21h2orf49	ENSORLP00000009679	ENSORLP00000015601	Uncharacterized protein.	Si:dkeyp-118h3.6.	0.907
LOC101167721	ddx1	ENSORLP00000009679	ENSORLP00000020904	Uncharacterized protein.	DEAD (Asp-Glu-Ala-Asp) box helicase 1.	0.797
LOC101167721	fam98a	ENSORLP00000009679	ENSORLP00000044105	Uncharacterized protein.	Uncharacterized protein.	0.908
LOC101167721	fam98b	ENSORLP00000009679	ENSORLP00000016280	Uncharacterized protein.	Family with sequence similarity 98 member B.	0.910
LOC101167721	rtcb	ENSORLP00000009679	ENSORLP00000024933	Uncharacterized protein.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.977
LOC101167721	rtraf	ENSORLP00000009679	ENSORLP00000004793	Uncharacterized protein.	RNA transcription, translation and transport factor.	0.976
LOC101167721	zbtb8os	ENSORLP00000009679	ENSORLP00000021467	Uncharacterized protein.	Zinc finger and BTB domain containing 8 opposite strand.	0.900
c21h2orf49	LOC101167721	ENSORLP00000015601	ENSORLP00000009679	Si:dkeyp-118h3.6.	Uncharacterized protein.	0.907
c21h2orf49	ddx1	ENSORLP00000015601	ENSORLP00000020904	Si:dkeyp-118h3.6.	DEAD (Asp-Glu-Ala-Asp) box helicase 1.	0.987
c21h2orf49	fam98a	ENSORLP00000015601	ENSORLP00000044105	Si:dkeyp-118h3.6.	Uncharacterized protein.	0.971
c21h2orf49	fam98b	ENSORLP00000015601	ENSORLP00000016280	Si:dkeyp-118h3.6.	Family with sequence similarity 98 member B.	0.999
c21h2orf49	rtcb	ENSORLP00000015601	ENSORLP00000024933	Si:dkeyp-118h3.6.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.999
c21h2orf49	rtraf	ENSORLP00000015601	ENSORLP00000004793	Si:dkeyp-118h3.6.	RNA transcription, translation and transport factor.	0.999
c21h2orf49	zbtb8os	ENSORLP00000015601	ENSORLP00000021467	Si:dkeyp-118h3.6.	Zinc finger and BTB domain containing 8 opposite strand.	0.970
ddx1	LOC101167721	ENSORLP00000020904	ENSORLP00000009679	DEAD (Asp-Glu-Ala-Asp) box helicase 1.	Uncharacterized protein.	0.797