Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klhl7Kelch-like family member 7. (616 aa)    
Predicted Functional Partners:
LOC101172920
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.923
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.923
fbxl17
F-box and leucine-rich repeat protein 17.
    
 0.730
cerkl
Ceramide kinase-like.
      
 0.722
LOC101173653
Fibronectin type-III domain-containing protein.
      
 0.717
srbd1
S1 RNA binding domain 1.
      
 0.691
TOMM7
Translocase of outer mitochondrial membrane 7.
      
 0.691
usp45
Ubiquitin carboxyl-terminal hydrolase.
      
 0.689
klhl6
Kelch-like family member 6.
    
  0.646
ttc8
Tetratricopeptide repeat domain 8.
    
 0.638
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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