Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
prkar1aProtein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) b. (380 aa)    
Predicted Functional Partners:
LOC101160964
Uncharacterized protein; Belongs to the protein kinase superfamily.
 
 
 0.982
LOC101170876
Uncharacterized protein; Belongs to the protein kinase superfamily.
 
 
 0.982
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
 
 
 0.981
LOC101163742
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
 
 
 0.981
prkx
Protein kinase X-linked; Belongs to the protein kinase superfamily.
 
 
 0.977
ENSORLP00000031239
Si:dkeyp-81f3.4.
    
  0.961
LOC101159349
Protein kinase, cAMP-dependent, regulatory, type II, alpha A.
  
  
 
0.915
H2MW65_ORYLA
Protein kinase, cAMP-dependent, regulatory, type II, alpha, B.
  
  
0.905
prkar2b
Protein kinase cAMP-dependent type II regulatory subunit beta.
  
  
 
0.904
H2MWB6_ORYLA
Solute carrier family 25 member 20; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.904
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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