STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam126aFamily with sequence similarity 126 member A. (500 aa)    
Predicted Functional Partners:
ttc7b
Tetratricopeptide repeat domain 7B.
    
 
 0.845
LOC101155292
Tetratricopeptide repeat domain 7A.
    
 
 0.813
PI4KA
Phosphatidylinositol 4-kinase alpha.
    
 
 0.704
ENSORLP00000027534
Uncharacterized protein.
    
 
 0.704
ENSORLP00000032251
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.704
ENSORLP00000039425
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.704
ENSORLP00000044755
Uncharacterized protein.
    
 
 0.696
efr3a
EFR3 homolog A (S. cerevisiae).
      
 0.560
efr3b
EFR3 homolog Bb (S. cerevisiae).
      
 0.558
tmem150a
Transmembrane protein 150Aa.
      
 0.531
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.