Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
hcrtHypocretin (orexin) neuropeptide precursor. (139 aa)    
Predicted Functional Partners:
hcrtr2
Hypocretin (orexin) receptor 2.
   
 0.996
LOC101161984
Pro-melanin-concentrating hormone, like.
   
 
 0.845
LOC101163216
Uncharacterized protein.
   
 
 0.845
CCK
Cholecystokinin.
     
 0.812
npy
Uncharacterized protein.
   
  
 0.766
trh
Uncharacterized protein.
     
 0.723
LOC101158034
Melanin-concentrating hormone receptor 2; Belongs to the G-protein coupled receptor 1 family.
    
 0.722
LOC101169046
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
    
 0.715
LOC101171147
Agouti related neuropeptide.
      
 0.695
LOC101164777
Uncharacterized protein.
   
  
 0.691
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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