STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hcrtHypocretin (orexin) neuropeptide precursor. (139 aa)    
Predicted Functional Partners:
hcrtr2
Hypocretin (orexin) receptor 2.
   
 0.976
LOC101161984
Pro-melanin-concentrating hormone, like.
   
 
 0.793
LOC101163216
Uncharacterized protein.
   
 
 0.793
trh
Uncharacterized protein.
     
 0.761
CCK
Cholecystokinin.
     
 0.746
npy
Uncharacterized protein.
   
  
 0.731
pomc
Proopiomelanocortin.
   
  
 0.660
LOC101160739
Isotocin; Belongs to the vasopressin/oxytocin family.
   
 
 0.658
LOC101164777
Uncharacterized protein.
   
  
 0.628
crh
Corticotropin-releasing hormone.
      
 0.615
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.