STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101160741Janus kinase and microtubule interacting protein 1. (851 aa)    
Predicted Functional Partners:
fastkd2
FAST kinase domains 2.
    
   0.675
LOC101165394
GRB2 related adaptor protein 2a.
      
 0.601
STK32A
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.590
H2LYU8_ORYLA
Uncharacterized protein.
      
 0.501
hivep1
Human immunodeficiency virus type I enhancer binding protein 1.
    
 
 0.464
gripap1
GRIP1 associated protein 1.
      
 0.464
znf831
Uncharacterized protein.
    
 
 0.464
clip4
Uncharacterized protein.
   
   0.455
clip3
CAP-GLY domain containing linker protein 3.
   
   0.455
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.