Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
znf367Zinc finger protein 367. (316 aa)    
Predicted Functional Partners:
ubox5
U-box domain containing 5.
     
 0.897
ptpra
Receptor-type tyrosine-protein phosphatase alpha.
    
 
 0.838
Mrps27
Mitochondrial ribosomal protein S27.
    
 0.832
thnsl2
Threonine synthase-like 2.
      
 0.821
fbxl17
F-box and leucine-rich repeat protein 17.
    
 
 0.772
ap5s1
Adaptor related protein complex 5 subunit sigma 1.
      
 0.766
LOC101168517
Uncharacterized protein.
      
 0.760
ccdc77
Coiled-coil domain containing 77.
      
 0.749
gnrh2
GnRH-associated peptide 2; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.
    
 0.748
DDRGK1
DDRGK domain containing 1.
      
 0.740
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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