STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101156597Furry homolog a (Drosophila). (2939 aa)    
Predicted Functional Partners:
stk38l
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 
 0.752
stk38
Serine/threonine kinase 38a; Belongs to the protein kinase superfamily.
   
 
 0.752
kiaa0930
Zgc:172139.
    
   0.709
LOC101161005
WH1 domain-containing protein.
    
   0.641
LOC101167890
Beta 3-glucosyltransferase b.
      
 0.589
HOMER1
Homer scaffold protein 1.
    
   0.497
LOC101163175
Homer scaffold protein 1b.
    
   0.497
etf1
Eukaryotic translation termination factor 1b.
    
   0.487
LOC101156310
Calcium binding protein 39-like.
    
 
 0.482
LOC101163094
Calcium binding protein 39, like 1.
    
 
 0.482
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.