STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mtrf1lMitochondrial translational release factor 1-like. (432 aa)    
Predicted Functional Partners:
LOC105355203
Uncharacterized protein.
      
 0.880
hemk1
HemK methyltransferase family member 1.
  
 
 0.878
mrpl58
Mitochondrial ribosomal protein L58.
   
 0.818
n6amt1
N-6 adenine-specific DNA methyltransferase 1.
  
 
 0.801
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
 
 0.792
mrrf
Mitochondrial ribosome recycling factor.
  
 
 0.779
ndufaf7
Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
   
  
 0.763
etfbkmt
Electron transfer flavoprotein subunit beta lysine methyltransferase.
      
 0.753
mrpl13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
 
 0.729
ndufaf5
NADH:ubiquinone oxidoreductase complex assembly factor 5.
   
  
 0.719
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (16%) [HD]