Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gpr137cG protein-coupled receptor 137c. (451 aa)    
Predicted Functional Partners:
iqcb1
IQ motif containing B1.
      
 0.846
CLSPN
Claspin.
      
 0.741
haus8
Uncharacterized protein.
      
 0.741
fancb
FA complementation group B.
      
 0.703
slc52a2
Solute carrier family 52 member 2.
      
 0.695
fbxo47
F-box domain-containing protein.
      
 0.695
txndc16
Thioredoxin domain containing 16.
      
 0.694
lrrc42
Leucine rich repeat containing 42.
      
 0.690
mei1
Meiotic double-stranded break formation protein 1.
      
 0.673
tmem221
Si:ch211-125m10.6.
      
 0.635
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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