Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
desi2Desumoylating isopeptidase 2. (212 aa)    
Predicted Functional Partners:
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
   
 
 0.690
mettl3
Methyltransferase like 3; Belongs to the MT-A70-like family.
   
 
 0.626
psmc3
Proteasome 26S subunit ATPase 3; Belongs to the AAA ATPase family.
   
   0.601
psmc4
Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.
   
   0.601
Timm29
Translocase of inner mitochondrial membrane 29.
      
 0.601
psmd12
Proteasome 26S subunit, non-ATPase 12.
   
   0.600
psmc5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
   
   0.598
psma1
Proteasome endopeptidase complex.
    
   0.596
psma4
Proteasome subunit alpha type.
    
   0.596
psmd8
Proteasome 26S subunit, non-ATPase 8.
    
   0.596
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.