rprd1b protein (Oryzias latipes) - STRING interaction network

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Score

rprd1b

Regulation of nuclear pre-mRNA domain containing 1B. (328 aa)

Predicted Functional Partners:

polr2a

0.948

polr2b

0.935

xrn2

0.889

DXO

0.888

rpap2

0.861

polr2c

0.807

polr2g

0.794

polr2d

0.781

polr2i

0.757

polr2f

0.750

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DXO	rpap2	ENSORLP00000010982	ENSORLP00000006356	Decapping exoribonuclease.	RNA polymerase II associated protein 2.	0.543
DXO	rprd1b	ENSORLP00000010982	ENSORLP00000004933	Decapping exoribonuclease.	Regulation of nuclear pre-mRNA domain containing 1B.	0.888
DXO	xrn2	ENSORLP00000010982	ENSORLP00000021547	Decapping exoribonuclease.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.994
polr2a	polr2b	ENSORLP00000038121	ENSORLP00000025492	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
polr2a	polr2c	ENSORLP00000038121	ENSORLP00000018932	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.999
polr2a	polr2d	ENSORLP00000038121	ENSORLP00000006639	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Polymerase (RNA) II (DNA directed) polypeptide D.	0.999
polr2a	polr2f	ENSORLP00000038121	ENSORLP00000018281	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.999
polr2a	polr2g	ENSORLP00000038121	ENSORLP00000003930	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Polymerase (RNA) II (DNA directed) polypeptide G-like.	0.999
polr2a	polr2i	ENSORLP00000038121	ENSORLP00000016680	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.998
polr2a	rpap2	ENSORLP00000038121	ENSORLP00000006356	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase II associated protein 2.	0.972
polr2a	rprd1b	ENSORLP00000038121	ENSORLP00000004933	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Regulation of nuclear pre-mRNA domain containing 1B.	0.948
polr2a	xrn2	ENSORLP00000038121	ENSORLP00000021547	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.640
polr2b	polr2a	ENSORLP00000025492	ENSORLP00000038121	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
polr2b	polr2c	ENSORLP00000025492	ENSORLP00000018932	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.999
polr2b	polr2d	ENSORLP00000025492	ENSORLP00000006639	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Polymerase (RNA) II (DNA directed) polypeptide D.	0.999
polr2b	polr2f	ENSORLP00000025492	ENSORLP00000018281	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.999
polr2b	polr2g	ENSORLP00000025492	ENSORLP00000003930	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Polymerase (RNA) II (DNA directed) polypeptide G-like.	0.999
polr2b	polr2i	ENSORLP00000025492	ENSORLP00000016680	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.991
polr2b	rpap2	ENSORLP00000025492	ENSORLP00000006356	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase II associated protein 2.	0.968
polr2b	rprd1b	ENSORLP00000025492	ENSORLP00000004933	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Regulation of nuclear pre-mRNA domain containing 1B.	0.935