STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tas1r2G_PROTEIN_RECEP_F3_4 domain-containing protein. (875 aa)    
Predicted Functional Partners:
pkd2l1
EF-hand domain-containing protein.
      
 0.634
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
    
   0.605
lamb3
Uncharacterized protein.
    
 
 0.584
amdhd1
Amidohydrolase domain containing 1.
   
  
 0.582
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
      
 0.567
irak1bp1
Interleukin-1 receptor-associated kinase 1 binding protein 1.
      
 0.555
LOC101175148
Aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase).
    
 
 0.539
LOC101172286
Crystallin, gamma MX; Belongs to the beta/gamma-crystallin family.
      
 0.534
Ush2a
Uncharacterized protein.
    
 
 0.531
cdk20
Cyclin-dependent kinase 20; Belongs to the protein kinase superfamily.
      
 0.527
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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