STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167026TNNI3 interacting kinase. (857 aa)    
Predicted Functional Partners:
fpgt
Fucose-1-phosphate guanylyltransferase.
 
    
 0.766
ect2
Epithelial cell transforming 2.
   
 
 0.699
tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1.
   
 0.579
map2k7
Mitogen-activated protein kinase kinase 7.
   
 0.556
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.548
H2LP85_ORYLA
Ras homolog gene family, member Gd.
   
 0.525
CDC42
Cell division cycle 42.
    
 0.525
LOC101162944
Ras homolog family member Gb.
   
 0.525
LOC101164400
Uncharacterized protein.
    
 0.525
sorbs2
Sorbin and SH3 domain containing 2a.
    
 0.521
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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