STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101164317BZIP domain-containing protein. (487 aa)    
Predicted Functional Partners:
LOC101166594
Ribosomal protein S6 kinase.
    
  0.900
LOC101160197
E1A binding protein p300 a.
   
 0.818
adcy9
CREB binding protein b.
   
 0.818
LOC101163392
CREB binding protein a.
   
 0.818
LOC101168870
E1A binding protein p300 b.
   
 0.818
crebrf
Creb3 regulatory factor.
    
 0.798
mbtps1
Membrane-bound transcription factor peptidase, site 1.
   
 
 0.724
mbtps2
Membrane-bound transcription factor peptidase, site 2.
     
 0.723
hcfc2
Host cell factor C2.
    
 
 0.695
hcfc1
Host cell factor C1a.
    
 
 0.695
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.