Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
twsg1Twisted gastrulation BMP signaling modulator 1. (222 aa)    
Predicted Functional Partners:
chrd
Chordin; Belongs to the chordin family.
    
 
 0.913
LOC101155758
Uncharacterized protein.
      
 0.727
disp1
Dispatched homolog 1 (Drosophila).
      
 0.638
bmp2
TGF_BETA_2 domain-containing protein.
    
 
 0.629
bmp4
Bone morphogenetic protein 4.
    
 
 0.629
LOC101163346
Bone morphogenetic protein 16.
    
 
 0.629
rnf43
Ring finger protein 43.
      
 0.611
bmper
BMP binding endothelial regulator.
      
 0.604
bambi
BMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family.
      
 0.579
slc24a4
Solute carrier family 24 member 4b; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.559
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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