Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GRIK2Glutamate ionotropic receptor kainate type subunit 2. (907 aa)    
Predicted Functional Partners:
grik4
Glutamate receptor, ionotropic, kainate 4.
  
0.956
LOC101155942
Uncharacterized protein.
  
0.956
grik5
Glutamate receptor, ionotropic, kainate 5.
  
0.956
grik1
Glutamate receptor, ionotropic, kainate 1b.
  
  
 
0.901
LOC101173326
Glutamate receptor, ionotropic, kainate 1a.
  
  
 
0.901
GRIK3
Glutamate ionotropic receptor kainate type subunit 3.
  
  
 
0.901
GRIK2-2
Glutamate ionotropic receptor kainate type subunit 2.
  
  
 
0.900
H2MFT6_ORYLA
Uncharacterized protein.
    
   0.737
hace1
HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1.
      
 0.691
LOC101163260
Calcium channel, voltage-dependent, gamma subunit 8a.
    
 0.651
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.