Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101156837Stromal interaction molecule 1a. (696 aa)    
Predicted Functional Partners:
LOC101168800
ORAI calcium release-activated calcium modulator 1b.
    
 0.986
LOC101164245
ORAI calcium release-activated calcium modulator 2.
    
 0.986
LOC101161896
ORAI calcium release-activated calcium modulator 1a.
   
 0.985
trpc1
Transient receptor potential cation channel, subfamily C, member 1; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.909
stard3
StAR-related lipid transfer (START) domain containing 3.
   
  
 0.663
vamp7
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
      
 0.611
LOC101168279
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.
    
 
 0.596
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
   
 
 0.533
Itpr2
Inositol 1,4,5-trisphosphate receptor, type 2.
    
 0.526
H2M6Z9_ORYLA
Uncharacterized protein.
    
 0.526
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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