STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DOCK2Dedicator of cytokinesis 2; Belongs to the DOCK family. (1682 aa)    
Predicted Functional Partners:
LOC101163549
Uncharacterized protein.
   
 0.893
crk
CRK proto-oncogene, adaptor protein.
    
 0.830
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.830
LOC110016423
Uncharacterized protein.
    
 0.830
LOC101169868
ELMO domain-containing protein.
   
 0.822
LOC101156647
Engulfment and cell motility 2.
   
 0.822
LOC101173701
Engulfment and cell motility 3.
   
 0.822
H2LP85_ORYLA
Ras homolog gene family, member Gd.
   
 0.792
LOC101162944
Ras homolog family member Gb.
   
 0.792
LOC101170577
Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.
     
 0.737
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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