STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2LGI3_ORYLAUDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. (201 aa)    
Predicted Functional Partners:
cyp1a
Cytochrome P450 1A1; Cytochromes P450 are a group of heme-thiolate monooxygenases. They oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.
   
 0.514
LOC101156534
Synaptotagmin Vb.
      
 0.463
LOC101156132
LHFPL tetraspan subfamily member 3.
      
 0.445
LOC101157534
Uncharacterized protein.
      
 0.445
ugdh
UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
      
 0.433
LOC101163102
Stromal cell-derived factor 2.
      
 0.430
LOC101162152
Ras-related GTP binding A.
      
 0.430
LOC111948904
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
  
 0.429
LOC110016637
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
  
 0.429
LOC101158289
Sperm associated antigen 1a.
   
  
 0.416
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.