Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H2LGJ7_ORYLASi:ch211-131k2.3. (167 aa)    
Predicted Functional Partners:
ppp5c
Serine/threonine-protein phosphatase.
    
 0.896
LOC101172535
Alanyl-tRNA synthetase domain containing 1.
 
 
    0.871
tbcb
Tubulin folding cofactor B.
   
 
 0.855
nktr
Natural killer cell triggering receptor.
   
 0.853
PPIG
Peptidylprolyl isomerase G.
   
 0.853
ppid
Peptidylprolyl isomerase D.
   
 0.853
trap1
TNF receptor-associated protein 1.
   
 0.811
LOC101169506
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.811
tsc1
TSC complex subunit 1b.
   
 0.811
ENSORLP00000031311
Uncharacterized protein.
   
 0.811
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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