Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
trpc4Transient receptor potential cation channel, subfamily C, member 4a; Belongs to the transient receptor (TC 1.A.4) family. (976 aa)    
Predicted Functional Partners:
trpc1
Transient receptor potential cation channel, subfamily C, member 1; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.794
trpa1
Transient receptor potential cation channel, subfamily A, member 1b; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.726
fkbpl
TPR_REGION domain-containing protein.
   
  
 0.695
LOC101158057
Canopy FGF signaling regulator 3.
      
 0.677
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
      
 0.672
LOC101159762
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
   
  
 0.646
LHFPL6
LHFPL tetraspan subfamily member 6.
      
 0.623
LOC101169131
Tripartite motif containing 3b.
    
 
 0.622
LOC101175583
Tripartite motif containing 3a.
    
 
 0.622
LOC101175336
ADP-ribosylation factor interacting protein 2a.
      
 0.618
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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