Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC110014938Single-pass membrane protein with aspartate-rich tail 1b. (60 aa)    
Predicted Functional Partners:
micu1
Mitochondrial calcium uptake 1.
    
 0.994
micu2
Mitochondrial calcium uptake 2.
    
 0.992
LOC101160267
Mitochondrial calcium uniporter dominant negative beta subunit.
    
 0.986
Mcu
Mitochondrial calcium uniporter.
    
 0.986
mcub
MCU domain-containing protein.
    
 0.986
LOC101164731
Mitochondrial calcium uptake family, member 3b.
    
 0.979
micu3
Mitochondrial calcium uptake family, member 3a.
    
 0.979
smdt1
Single-pass membrane protein with aspartate-rich tail 1a.
  
  
 
0.901
ENSORLP00000042440
Uncharacterized protein.
  
  
 
0.901
atp5f1d
ATP synthase F1 subunit delta.
   
    0.716
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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