STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
miga2Mitoguardin 2. (591 aa)    
Predicted Functional Partners:
miga1
Mitoguardin 1.
  
 
 
0.688
nexn
Ig-like domain-containing protein.
 
   
 0.665
LOC101164300
RNA pseudouridine synthase D4.
   
  
 0.586
surf6
Surfeit 6.
     
 0.575
foxred1
FAD-dependent oxidoreductase domain containing 1.
   
  
 0.504
APOO
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
      
 0.483
tekt2
Tektin 2 (testicular).
      
 0.482
dcxr
Dicarbonyl/L-xylulose reductase.
      
 0.481
pet100
PET100 cytochrome c oxidase chaperone.
      
 0.478
stard3
StAR-related lipid transfer (START) domain containing 3.
      
 0.471
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.