Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
vapaVAMP (vesicle-associated membrane protein)-associated protein A, like. (226 aa)    
Predicted Functional Partners:
osbpl9
Oxysterol-binding protein; Belongs to the OSBP family.
   
 
 0.862
bcap29
Uncharacterized protein.
   
 0.819
bcap31
B cell receptor associated protein 31.
   
 0.819
stard3
StAR-related lipid transfer (START) domain containing 3.
    
 
 0.815
LOC105355721
Uncharacterized protein.
    
 0.792
zfyve27
Zinc finger, FYVE domain containing 27.
    
 
 0.778
sec63
SEC63 homolog, protein translocation regulator.
    
 
 0.761
ttc1
Tetratricopeptide repeat domain 1.
    
 
 0.741
ddost
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]
   
 0.740
vcp
Valosin containing protein; Belongs to the AAA ATPase family.
   
 
 0.731
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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