STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STRADBSTE20 related adaptor beta. (422 aa)    
Predicted Functional Partners:
stk11
Serine/threonine kinase 11; Belongs to the protein kinase superfamily.
   
 0.988
prkaa2
Non-specific serine/threonine protein kinase.
   
0.950
prkaa1
Non-specific serine/threonine protein kinase.
   
0.950
LOC101156310
Calcium binding protein 39-like.
    
 0.943
LOC101163094
Calcium binding protein 39, like 1.
    
 0.943
LOC101165166
Calcium binding protein 39.
    
 0.943
sec63
SEC63 homolog, protein translocation regulator.
    
 
 0.818
sec61g
SEC61 translocon gamma subunit.
   
 
 0.811
sec62
SEC62 homolog, preprotein translocation factor.
    
 
 0.805
sec61b
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.680
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.