STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zbtb14Uncharacterized protein. (415 aa)    
Predicted Functional Partners:
rad1
RAD1 homolog (S. pombe).
    
   0.893
hus1
Checkpoint protein; Belongs to the HUS1 family.
    
   0.744
fmr1
Fragile X mental retardation 1.
    
 
 0.707
rps7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.679
hibch
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 
 0.626
foxl1
Forkhead box L1.
    
 0.623
LOC101174771
Solute carrier family 8 member 1b; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.619
foxc1
Forkhead box C1a.
    
 0.601
onecut1
One cut domain family member.
    
 
 0.587
foxa1
Fork-head domain-containing protein.
    
 0.560
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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