Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101168885Tripartite motif containing 47. (459 aa)    
Predicted Functional Partners:
LOC101168962
Guanine nucleotide binding protein (G protein), alpha 14a.
      
 0.618
man2b2
Alpha-mannosidase.
      
 0.617
LOC101170468
Zgc:163057; Belongs to the globin family.
      
 0.507
LOC101160356
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
     
 0.506
gb
Hemoglobin embryonic subunit alpha; Involved in oxygen transport from gills to the various peripheral tissues.
      
 0.505
rps26
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
    
 
 0.500
LOC101174997
GLOBIN domain-containing protein; Belongs to the globin family.
      
 0.499
LOC101175238
GLOBIN domain-containing protein; Belongs to the globin family.
      
 0.499
trim37
Tripartite motif containing 37.
    
 
 0.469
trim44
Tripartite motif containing 44.
    
 
 0.451
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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