STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LGV0_ORYLAANK_REP_REGION domain-containing protein. (740 aa)    
Predicted Functional Partners:
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.956
rbpjl
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.934
numb
NUMB endocytic adaptor protein.
    
 0.928
psen2
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.915
lfng
Beta-1,3-N-acetylglucosaminyltransferase.
    
  0.910
rfng
Beta-1,3-N-acetylglucosaminyltransferase.
    
  0.910
LOC101155324
Beta-1,3-N-acetylglucosaminyltransferase.
    
  0.910
LOC101174979
Uncharacterized protein.
    
  0.910
dvl3
Dishevelled segment polarity protein 3a.
    
  0.909
dvl2
Dishevelled segment polarity protein 2.
    
  0.909
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.