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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emc1ER membrane protein complex subunit 1. (962 aa)    
Predicted Functional Partners:
emc4
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
    
 0.997
emc2
ER membrane protein complex subunit 2.
   
 0.997
emc6
ER membrane protein complex subunit 6.
    
 0.978
emc7
ER membrane protein complex subunit 7.
    
 0.978
mmgt1
Membrane magnesium transporter 1.
    
 0.978
emc10
ER membrane protein complex subunit 10.
   
 0.975
emc8
ER membrane protein complex subunit 8.
    
 0.967
LOC101173295
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
    
 0.963
LOC101162909
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
    
 0.963
dctn4
Dynactin 4.
    
 
 0.930
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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