Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
emc1ER membrane protein complex subunit 1. (962 aa)    
Predicted Functional Partners:
emc8
ER membrane protein complex subunit 8.
    
 0.999
emc2
ER membrane protein complex subunit 2.
   
 0.999
emc10
ER membrane protein complex subunit 10.
   
 0.998
emc7
ER membrane protein complex subunit 7.
    
 0.998
mmgt1
Membrane magnesium transporter 1.
    
 0.998
emc4
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
    
 0.998
emc6
ER membrane protein complex subunit 6.
    
 0.997
LOC101173295
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
    
 0.995
LOC101162909
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
    
 0.995
sec63
SEC63 homolog, protein translocation regulator.
   
 
 0.915
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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