STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tfpi2Tissue factor pathway inhibitor. (284 aa)    
Predicted Functional Partners:
LOC101170410
Zgc:136461; Belongs to the peptidase S1 family.
    
 0.744
f3
Coagulation factor IIIa.
     
 0.743
LOC101167055
Uncharacterized protein.
    
 0.653
LOC101167304
Uncharacterized protein.
    
 0.653
HGFAC
HGF activator.
    
 0.601
LOC105356289
Zgc:112160; Belongs to the peptidase S1 family.
    
 0.591
LOC101164095
Uncharacterized protein.
     
 0.568
serpind1
Serpin peptidase inhibitor, clade D (heparin cofactor), member 1; Belongs to the serpin family.
   
 
 0.565
Col24a1
LAM_G_DOMAIN domain-containing protein.
      
 0.503
stil
SERPIN domain-containing protein; Belongs to the serpin family.
   
 
 0.490
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.