STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tfpi2Tissue factor pathway inhibitor. (284 aa)    
Predicted Functional Partners:
LOC101170410
Zgc:136461; Belongs to the peptidase S1 family.
    
 0.756
slc22a18
Solute carrier family 22 member 18.
   
  
 0.706
f3
Coagulation factor IIIa.
     
 0.646
LOC101164095
Uncharacterized protein.
     
 0.646
ift88
Intraflagellar transport 88 homolog.
    
   0.625
cluap1
Clusterin associated protein 1.
    
   0.620
cdk18
Cyclin dependent kinase 18; Belongs to the protein kinase superfamily.
      
 0.619
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
   0.615
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
   0.615
stil
SERPIN domain-containing protein; Belongs to the serpin family.
   
 
 0.613
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.