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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101171917Myosin, light chain kinase 5. (860 aa)    
Predicted Functional Partners:
calm3
Calmodulin-A; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.
    
 0.934
H2LQV6_ORYLA
Uncharacterized protein.
   
 0.924
H2MTE5_ORYLA
Myosin, light chain 13.
   
 0.924
LOC101160287
Uncharacterized protein.
   
  0.924
LOC101167032
Myosin, light chain 9a, regulatory.
   
 0.923
MYL2
Myosin, light chain 2b, regulatory, cardiac, slow.
   
 0.921
MYL2-2
Myosin light chain 2.
   
 0.921
calml4
Calmodulin-like 4a.
    
 0.916
LOC101172355
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
 
0.902
LOC101160964
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 
0.900
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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