STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101163953Glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b. (1552 aa)    
Predicted Functional Partners:
LOC101169874
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
0.910
LOC101175170
Uncharacterized protein.
   
0.910
LOC101172563
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.813
cask
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.813
LOC101164674
Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, b.
     
 
0.695
grin2a
Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, a.
     
 
0.695
LOC101164378
Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b.
     
 
0.695
LOC101172912
Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a.
     
 
0.695
gria2
Uncharacterized protein.
   
0.648
LOC101164162
Glutamate receptor, ionotropic, AMPA 1a.
   
0.635
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.