STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELAVL2ELAV-like protein; Belongs to the RRM elav family. (411 aa)    
Predicted Functional Partners:
igf2bp3
Insulin-like growth factor 2 mRNA binding protein 3.
   
 
 0.740
LOC101163271
RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.
  
 
 0.674
rbfox3
RNA binding fox-1 homolog 3b.
  
 0.619
tra2b
RRM domain-containing protein.
  
 0.618
tra2a
RRM domain-containing protein.
  
 0.615
rbm45
RNA binding motif protein 45.
    
   0.607
LOC101160403
RNA binding motif protein 38.
  
   
 0.592
rbm24
RNA binding motif protein 24a.
  
   
 0.585
LOC101161576
RNA binding motif protein 24b.
  
   
 0.584
ddx6
DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.
   
 0.547
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.