ybx1 protein (Oryzias latipes) - STRING interaction network

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Score

ybx1

Y-box binding protein. (306 aa)

Predicted Functional Partners:

ALYREF

0.890

dhx9

0.831

LOC101164733

0.816

eif4a3

0.812

snrpd1

0.762

ddx6

0.762

LOC101166148

0.762

ncbp2

0.741

rps27a

0.733

NCBP1

0.731

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALYREF	LOC101164733	ENSORLP00000015435	ENSORLP00000032423	Aly/REF export factor.	Serine and arginine rich splicing factor 9.	0.897
ALYREF	LOC101166148	ENSORLP00000015435	ENSORLP00000044438	Aly/REF export factor.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.446
ALYREF	NCBP1	ENSORLP00000015435	ENSORLP00000026641	Aly/REF export factor.	Nuclear cap binding protein subunit 1.	0.993
ALYREF	ddx6	ENSORLP00000015435	ENSORLP00000029180	Aly/REF export factor.	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	0.446
ALYREF	dhx9	ENSORLP00000015435	ENSORLP00000009349	Aly/REF export factor.	DEAH (Asp-Glu-Ala-His) box helicase 9.	0.874
ALYREF	eif4a3	ENSORLP00000015435	ENSORLP00000040100	Aly/REF export factor.	Eukaryotic translation initiation factor 4A3.	0.999
ALYREF	ncbp2	ENSORLP00000015435	ENSORLP00000014087	Aly/REF export factor.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.939
ALYREF	snrpd1	ENSORLP00000015435	ENSORLP00000015671	Aly/REF export factor.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.651
ALYREF	ybx1	ENSORLP00000015435	ENSORLP00000005291	Aly/REF export factor.	Y-box binding protein.	0.890
LOC101164733	ALYREF	ENSORLP00000032423	ENSORLP00000015435	Serine and arginine rich splicing factor 9.	Aly/REF export factor.	0.897
LOC101164733	NCBP1	ENSORLP00000032423	ENSORLP00000026641	Serine and arginine rich splicing factor 9.	Nuclear cap binding protein subunit 1.	0.888
LOC101164733	dhx9	ENSORLP00000032423	ENSORLP00000009349	Serine and arginine rich splicing factor 9.	DEAH (Asp-Glu-Ala-His) box helicase 9.	0.706
LOC101164733	eif4a3	ENSORLP00000032423	ENSORLP00000040100	Serine and arginine rich splicing factor 9.	Eukaryotic translation initiation factor 4A3.	0.970
LOC101164733	ncbp2	ENSORLP00000032423	ENSORLP00000014087	Serine and arginine rich splicing factor 9.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.899
LOC101164733	rps27a	ENSORLP00000032423	ENSORLP00000038189	Serine and arginine rich splicing factor 9.	Ribosomal protein S27a.	0.669
LOC101164733	snrpd1	ENSORLP00000032423	ENSORLP00000015671	Serine and arginine rich splicing factor 9.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.507
LOC101164733	ybx1	ENSORLP00000032423	ENSORLP00000005291	Serine and arginine rich splicing factor 9.	Y-box binding protein.	0.816
LOC101166148	ALYREF	ENSORLP00000044438	ENSORLP00000015435	Uncharacterized protein; Belongs to the DEAD box helicase family.	Aly/REF export factor.	0.446
LOC101166148	NCBP1	ENSORLP00000044438	ENSORLP00000026641	Uncharacterized protein; Belongs to the DEAD box helicase family.	Nuclear cap binding protein subunit 1.	0.440
LOC101166148	ddx6	ENSORLP00000044438	ENSORLP00000029180	Uncharacterized protein; Belongs to the DEAD box helicase family.	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	0.900