Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H2LH39_ORYLADNL-type zinc finger. (202 aa)    
Predicted Functional Partners:
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
    
 
 0.891
wwox
WW domain containing oxidoreductase.
   
  
 0.718
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
      
 0.690
LOC101156527
Tripartite motif containing 35-28.
      
 0.673
timm13
Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family.
   
  
 0.653
ccdc127
Coiled-coil domain containing 127a.
      
 0.639
pign
Phosphatidylinositol glycan anchor biosynthesis, class N.
      
 0.615
cdpf1
Cysteine rich DPF motif domain containing 1.
      
 0.615
ttc37
Tetratricopeptide repeat domain 37.
      
 0.600
drap1
DR1-associated protein 1 (negative cofactor 2 alpha).
   
  
 0.588
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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