STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAP1Caspase activity and apoptosis inhibitor 1. (328 aa)    
Predicted Functional Partners:
akap17a
A kinase (PRKA) anchor protein 17A.
   
   0.931
snx13
Sorting nexin 13.
      
 0.708
plaa
Phospholipase A2-activating protein.
 
 
  
 0.609
gadd45gip1
Growth arrest and DNA-damage-inducible, gamma interacting protein 1.
      
 0.608
BFAR
Bifunctional apoptosis regulator.
      
 0.606
zswim8
Zinc finger, SWIM-type containing 8.
      
 0.605
exosc8
Exosome component 8.
    
   0.602
jmjd6
Jumonji domain containing 6, arginine demethylase and lysine hydroxylase.
    
   0.599
bora
Bora aurora kinase A activator.
      
 0.594
ccnk
Cyclin K; Belongs to the cyclin family.
   
  
 0.512
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.