Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lrrc8aLeucine rich repeat containing 8 VRAC subunit Aa. (796 aa)    
Predicted Functional Partners:
LOC101156485
Leucine rich repeat containing 8 VRAC subunit C.
     
  0.546
LOC101174174
Leucine rich repeat containing 8 VRAC subunit Db.
   
  0.540
LOC101159197
Si:ch211-106h11.1.
   
  0.540
lrrc8d
Leucine rich repeat containing 8 VRAC subunit Da.
   
  0.540
dcn
Decorin; May affect the rate of fibrils formation.
  
     0.525
LOC101159101
Si:dkey-32e6.6.
  
     0.501
lrrc20
Leucine rich repeat containing 20.
  
     0.498
H2MBJ4_ORYLA
Uncharacterized protein.
  
     0.496
LOC101166161
Uncharacterized protein.
    
 0.488
clcn6
Chloride channel 6; Belongs to the chloride channel (TC 2.A.49) family.
      
 0.482
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.