STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101159522Odorant receptor, family H, subfamily 129, member 1. (296 aa)    
Predicted Functional Partners:
naa25
N(alpha)-acetyltransferase 25, NatB auxiliary subunit.
      
 0.636
IER5L-2
Immediate early response 5-like.
      
 0.628
ost4
Oligosaccharyltransferase complex subunit 4 (non-catalytic).
      
 0.535
ENSORLP00000026624
FXYD domain-containing ion transport regulator; Belongs to the FXYD family.
      
 0.524
zbtb11
Zinc finger and BTB domain containing 11.
    
 0.495
lin7a
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
    
 
 0.467
otud1
OTU deubiquitinase 1.
      
 0.467
LOC101169319
Uncharacterized protein.
      
 0.462
LOC101169980
RNA binding motif protein 4.3.
      
 0.462
LOC101169128
RNA binding motif protein 4.3.
      
 0.462
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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