STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101164209Uncharacterized protein. (1204 aa)    
Predicted Functional Partners:
LOC105356938
ZP domain-containing protein.
  
     0.474
LOC101172194
Si:ch211-188c16.1.
  
     0.437
LOC101162607
Leucine zipper, putative tumor suppressor family member 3b.
  
 
  0.428
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.426
ENSORLP00000027366
Uncharacterized protein.
  
 
  0.416
wdr18
WD repeat domain 18.
   
 0.415
ENSORLP00000035359
Uncharacterized protein.
  
 
  0.414
aknad1
Uncharacterized protein.
  
 
  0.414
ENSORLP00000040026
Uncharacterized protein.
  
 
  0.413
ENSORLP00000041700
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
  
     0.412
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.