STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HES2Hes family bHLH transcription factor 2, tandem duplicate 1. (201 aa)    
Predicted Functional Partners:
fancg
Uncharacterized protein.
   
 
 0.573
fancl
FA complementation group L.
    
 
 0.566
fancf
FA complementation group F.
    
 
 0.562
fancc
FA complementation group C.
    
   0.552
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.548
rbpjl
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.548
ascl1
Achaete-scute family bHLH transcription factor 1a.
   
 
 0.421
LOC101163844
Uncharacterized protein.
    
0.413
LOC101170445
Hes related family bHLH transcription factor with YRPW motif like.
    
0.413
LOC101169991
Uncharacterized protein.
    
 0.413
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.