STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
acot7Acyl-CoA thioesterase 7. (370 aa)    
Predicted Functional Partners:
LOC105358390
Uncharacterized protein.
    
 0.951
LOC101166497
Uncharacterized protein.
    
 0.951
LOC101172604
Thioesterase superfamily member 4.
     
 0.941
LOC105357122
Uncharacterized protein.
  
 
 0.921
LOC110014434
Uncharacterized protein.
  
 
 0.921
mblac2
Metallo-beta-lactamase domain containing 2.
  
 
  0.902
gpr153
G protein-coupled receptor 153.
      
 0.802
acot13
Acyl-CoA thioesterase 13.
     
 0.788
ddx51
DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family.
   
 
 0.781
rer1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.
      
 0.777
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.