STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acot7Acyl-CoA thioesterase 7. (370 aa)    
Predicted Functional Partners:
LOC101172604
Thioesterase superfamily member 4.
     
 0.951
LOC105358390
Uncharacterized protein.
  
 
 0.937
LOC101166497
Uncharacterized protein.
  
 
 0.937
LOC110014434
Uncharacterized protein.
  
 
 0.916
tecr
Trans-2,3-enoyl-CoA reductase b.
     
 0.902
LOC101171706
Trans-2,3-enoyl-CoA reductase-like 2a.
     
 0.902
gpr153
G protein-coupled receptor 153.
      
 0.721
acot13
Acyl-CoA thioesterase 13.
   
 
 0.719
ddx51
DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family.
   
 
 0.696
ppih
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
     
 0.663
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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