Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zeb1Zinc finger E-box binding homeobox 1b. (1034 aa)    
Predicted Functional Partners:
spi1
Spi-1 proto-oncogene b.
      
 0.764
ctbp1
C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.736
LOC101158706
C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.736
LOC101168811
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.736
ctbp2
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.736
sirt1
Deacetylase sirtuin-type domain-containing protein.
    
 0.713
sox18
Uncharacterized protein.
    
 0.713
LOC101160197
E1A binding protein p300 a.
    
 
 0.620
LOC101168870
E1A binding protein p300 b.
    
 
 0.620
sox2
SOX3 protein.
    
 0.583
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (22%) [HD]